Main article

Andika Pratama*
Faculty of Computer Science, Universitas Brawijaya, Malang 65145, Indonesia
andika.pratama@ub.ac.id
Dewi Nur Lestari
Department of Informatics, Universitas Diponegoro, Semarang 50275, Indonesia
Bambang Hartono
Department of Information Systems, Universitas Hasanuddin, Makassar 90245, Indonesia
Sri Wahyuni
Department of Computer Science, Universitas Sumatera Utara, Medan 20155, Indonesia
Rudi Setiawan
Department of Computer Science, Universitas Padjadjaran, Bandung 45363, Indonesia

Abstract

Modern bioinformatics has entered a multi-omics era in which genomic, transcriptomic, proteomic, and metabolomic datasets accumulate at unprecedented velocity, volume, and variety. Conventional centralized governance — institutional databases protected by role-based access control — struggles with single points of failure, opaque consent enforcement, weak provenance, and brittle interoperability across jurisdictions. Blockchain technology has been proposed as an alternative substrate for trustworthy multi-omics data sharing, but the literature remains fragmented across isolated mechanisms (immutability, smart contracts, on-chain storage) without a coherent system view. This article systematically reviews 82 peer-reviewed studies published between 2017 and 2025, indexed in Scopus, IEEE Xplore, ScienceDirect, SpringerLink, and the ACM Digital Library, using a five-stage screening protocol and a five-question quality assessment rubric. Building on the synthesis, we propose a six-layer architectural framework that combines a permissioned blockchain ledger, smart-contract-based consent and access control, privacy-preserving cryptography (zero-knowledge proofs, homomorphic encryption, differential privacy), decentralized identity, off-chain storage on the InterPlanetary File System, and native interoperability with HL7 FHIR-compliant electronic health records. A multi-criterion comparison shows that Practical Byzantine Fault Tolerance is best suited to the latency, throughput, and energy constraints of multi-omics workflows, outperforming Proof-of-Work and Proof-of-Stake on five of six evaluation dimensions. Compared with traditional security baselines, blockchain delivers measurable advantages in tamper-resistance, provenance, and patient-centric consent, but does not universally dominate on confidentiality and scalability. The framework offers a practical roadmap for big-data governance in life-science research while highlighting open problems in standardization, regulatory alignment, and energy efficiency.

Article details

How to Cite

Big Data Governance for Multi-Omics Data Sharing: A Blockchain, Smart Contract, and Off-Chain Storage Framework. (2025). Data Science & Big Data Technology, 3(2), 1-25. https://doi.org/10.63646/dsbdt.2025.030201